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LOC106755894 alpha-1,4-glucan-protein synthase [UDP-forming]-like [ Vigna radiata ]

Gene ID: 106755894, updated on 11-Jan-2024

Summary

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Gene symbol
LOC106755894
Gene description
alpha-1,4-glucan-protein synthase [UDP-forming]-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna radiata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Vradiata_ver6 (GCF_000741045.1) 2 NC_028352.1 (24022014..24023551)

Chromosome 2 - NC_028352.1Genomic Context describing neighboring genes Neighboring gene protein COBRA Neighboring gene COBRA-like protein 4 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene truncated transcription factor CAULIFLOWER A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_028352.1 Chromosome 2 Reference Vradiata_ver6 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-arabinopyranose mutase 1-like; alpha-1,4-glucan-protein synthase [UDP-forming]-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vigna radiata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vradiata_ver6 Primary Assembly

Genomic

  1. NC_028352.1 Reference Vradiata_ver6 Primary Assembly

    Range
    24022014..24023551
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022776049.1 → XP_022631770.1  UDP-arabinopyranose mutase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A3Q0EJB9
    Conserved Domains (1) summary
    PLN03180
    Location:6 → 379
    PLN03180; reversibly glycosylated polypeptide; Provisional

  2. XM_014638121.2 → XP_014493607.1  alpha-1,4-glucan-protein synthase [UDP-forming]-like isoform X2

    UniProtKB/TrEMBL
    A0A1S3TIL9
    Conserved Domains (1) summary
    PLN03180
    Location:6 → 347
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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