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sotv exostosin glycosyltransferase sotv [ Dinoponera quadriceps ]

Gene ID: 106750617, updated on 10-Oct-2024

Summary

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Gene symbol
sotv
Gene description
exostosin glycosyltransferase sotv
Gene type
protein coding
RefSeq status
MODEL
Organism
Dinoponera quadriceps
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Ponerinae; Ponerini; Dinoponera
Orthologs
fruit fly honey bee all
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Genomic context

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See sotv in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM131382v1 (GCF_001313825.1) Unplaced Scaffold NW_014560030.1 (1010824..1014671)

NW_014560030.1Genomic Context describing neighboring genes Neighboring gene Partner of paired Neighboring gene RAS oncogene family member Rab35 Neighboring gene Taspase 1 Neighboring gene sentrin-specific protease 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014560030.1 Unplaced Scaffold Reference ASM131382v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dinoponera quadriceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM131382v1

Genomic

  1. NW_014560030.1 Reference ASM131382v1

    Range
    1010824..1014671
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014631086.1 → XP_014486572.1  exostosin-2

    UniProtKB/TrEMBL
    A0A6P3Y990
    Conserved Domains (2) summary
    pfam03016
    Location:104 → 380
    Exostosin; Exostosin family
    pfam09258
    Location:453 → 688
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
Heading Accession and Version

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