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LOC106744784 polypeptide N-acetylgalactosaminyltransferase 1-like [ Dinoponera quadriceps ]

Gene ID: 106744784, updated on 1-Oct-2024

Summary

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Gene symbol
LOC106744784
Gene description
polypeptide N-acetylgalactosaminyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Dinoponera quadriceps
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Ponerinae; Ponerini; Dinoponera
Orthologs
honey bee all
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Genomic context

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See LOC106744784 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM131382v1 (GCF_001313825.1) Unplaced Scaffold NW_014555591.1 (43916..48603)

NW_014555591.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 10 Neighboring gene secretory 31 Neighboring gene adult enhancer factor 1-like Neighboring gene PR domain zinc finger protein 16-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014555591.1 Unplaced Scaffold Reference ASM131382v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dinoponera quadriceps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM131382v1

Genomic

  1. NW_014555591.1 Reference ASM131382v1

    Range
    43916..48603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014619818.1 → XP_014475304.1  polypeptide N-acetylgalactosaminyltransferase 1-like

    UniProtKB/TrEMBL
    A0A6P3XBN0
    Conserved Domains (4) summary
    cd02510
    Location:160 → 461
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:156 → 457
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:513 → 601
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:472 → 599
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_014619819.1 → XP_014475305.1  polypeptide N-acetylgalactosaminyltransferase 1-like

    UniProtKB/TrEMBL
    A0A6P3XBN0
    Conserved Domains (4) summary
    cd02510
    Location:160 → 461
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:156 → 457
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:513 → 601
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:472 → 599
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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