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B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 [ Alligator mississippiensis (American alligator) ]

Gene ID: 106737906, updated on 8-May-2024

Summary

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Gene symbol
B3GNT3
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
Locus tag
Y1Q_0017444
See related
EnsemblRapid:ENSAMIG00015001713
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
B3GNT6; B3GNT3-1
Orthologs
human mouse all
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Genomic context

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See B3GNT3 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 16 NC_081839.1 (2045686..2048397, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017710365.1 (18481..25065)

Chromosome 16 - NC_081839.1Genomic Context describing neighboring genes Neighboring gene Janus kinase 3 Neighboring gene insulin like 3 Neighboring gene FCH and mu domain containing endocytic adaptor 1 Neighboring gene microtubule associated protein 1S

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3
Names
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081839.1 Reference rAllMis1 Primary Assembly

    Range
    2045686..2048397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019489215.2 → XP_019344760.2  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3

    Related
    ENSAMIP00015002058.1, ENSAMIT00015002893.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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