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UMOD uromodulin [ Alligator mississippiensis (American alligator) ]

Gene ID: 106737611, updated on 6-Jun-2024

Summary

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Gene symbol
UMOD
Gene description
uromodulin
Locus tag
Y1Q_0008239
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See UMOD in Genome Data Viewer
Location:
chromosome: 13
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 13 NC_081836.1 (45831929..45846882, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711568.1 (10847175..10858078, complement)

Chromosome 13 - NC_081836.1Genomic Context describing neighboring genes Neighboring gene IQ motif containing K Neighboring gene G protein-coupled receptor class C group 5 member B Neighboring gene G protein-coupled receptor 139 Neighboring gene acyl-coenzyme A synthetase ACSM4, mitochondrial Neighboring gene protein disulfide isomerase like, testis expressed Neighboring gene acyl-coenzyme A synthetase ACSM4, mitochondrial-like Neighboring gene uncharacterized LOC109284906

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neutrophil migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uromodulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081836.1 Reference rAllMis1 Primary Assembly

    Range
    45831929..45846882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019494642.2 → XP_019350187.2  uromodulin

    UniProtKB/TrEMBL
    A0A151N1G8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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