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HSD17B8 hydroxysteroid 17-beta dehydrogenase 8 [ Alligator mississippiensis (American alligator) ]

Gene ID: 106737258, updated on 8-May-2024

Summary

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Gene symbol
HSD17B8
Gene description
hydroxysteroid 17-beta dehydrogenase 8
Locus tag
Y1Q_0004992
See related
EnsemblRapid:ENSAMIG00015007773
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See HSD17B8 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 11 NC_081834.1 (64761905..64765086)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711269.1 (106525..109433, complement)

Chromosome 11 - NC_081834.1Genomic Context describing neighboring genes Neighboring gene collagen type XI alpha 2 chain Neighboring gene retinoid X receptor beta Neighboring gene solute carrier family 39 member 7 Neighboring gene ring finger protein 1 Neighboring gene VPS52 subunit of GARP complex

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
(3R)-3-hydroxyacyl-CoA dehydrogenase
Names
estradiol 17-beta-dehydrogenase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081834.1 Reference rAllMis1 Primary Assembly

    Range
    64761905..64765086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059715320.1 → XP_059571303.1  (3R)-3-hydroxyacyl-CoA dehydrogenase isoform X1

  2. XM_059715321.1 → XP_059571304.1  (3R)-3-hydroxyacyl-CoA dehydrogenase isoform X2

  3. XM_059715322.1 → XP_059571305.1  (3R)-3-hydroxyacyl-CoA dehydrogenase isoform X3

    Related
    ENSAMIP00015009603.1, ENSAMIT00015013999.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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