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ALPL alkaline phosphatase, biomineralization associated [ Alligator mississippiensis (American alligator) ]

Gene ID: 106736976, updated on 8-May-2024

Summary

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Gene symbol
ALPL
Gene description
alkaline phosphatase, biomineralization associated
Locus tag
Y1Q_0023293
See related
EnsemblRapid:ENSAMIG00015016242
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See ALPL in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 13 NC_081836.1 (2411558..2455114, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713475.1 (3259635..3303503)

Chromosome 13 - NC_081836.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 48 Neighboring gene RAP1 GTPase activating protein Neighboring gene endothelin converting enzyme 1 Neighboring gene uncharacterized LOC132244623

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alkaline phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline phosphatase, tissue-nonspecific isozyme
Names
alkaline phosphatase, liver/bone/kidney

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081836.1 Reference rAllMis1 Primary Assembly

    Range
    2411558..2455114 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006261695.4 → XP_006261757.2  alkaline phosphatase, tissue-nonspecific isozyme

    UniProtKB/TrEMBL
    A0A151MJC1
    Related
    ENSAMIP00015021593.1, ENSAMIT00015030632.1
    Conserved Domains (1) summary
    pfam00245
    Location:50 → 488
    Alk_phosphatase; Alkaline phosphatase
Nucleotide Protein
Heading Accession and Version

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