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PKD1L3 polycystin 1 like 3, transient receptor potential channel interacting [ Alligator sinensis (Chinese alligator) ]

Gene ID: 106722948, updated on 13-Mar-2024

Summary

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Gene symbol
PKD1L3
Gene description
polycystin 1 like 3, transient receptor potential channel interacting
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See PKD1L3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842907.1 (247871..256382, complement)

NW_005842907.1Genomic Context describing neighboring genes Neighboring gene ataxin 1 like Neighboring gene zinc finger protein 821 Neighboring gene IST1 factor associated with ESCRT-III Neighboring gene dihydroorotate dehydrogenase (quinone) Neighboring gene haptoglobin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842907 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycystic kidney disease protein 1-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842907.1 Reference ASM45574v1 Primary Assembly

    Range
    247871..256382 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014525871.2 → XP_014381357.1  polycystic kidney disease protein 1-like 3

    UniProtKB/TrEMBL
    A0A1U8DJG7
    Conserved Domains (1) summary
    smart00303
    Location:345 → 382
    GPS; G-protein-coupled receptor proteolytic site domain
Nucleotide Protein
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