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eIF4A eukaryotic translation initiation factor 4A [ Halyomorpha halys (brown marmorated stink bug) ]

Gene ID: 106686370, updated on 7-Aug-2024

Summary

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Gene symbol
eIF4A
Gene description
eukaryotic translation initiation factor 4A
See related
EnsemblRapid:LOC106686370
Gene type
protein coding
RefSeq status
MODEL
Organism
Halyomorpha halys
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Heteroptera; Panheteroptera; Pentatomomorpha; Pentatomoidea; Pentatomidae; Pentatominae; Halyomorpha
Orthologs
fruit fly all
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Genomic context

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See eIF4A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_07 current Hhal_1.1 (GCF_000696795.3) Unplaced Scaffold NW_027106137.1 (637252..649936, complement)
100 previous assembly Hhal_1.0 (GCF_000696795.1) Unplaced Scaffold NW_014466451.1 (637252..649920, complement)

NW_027106137.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106686360 Neighboring gene uncharacterized LOC136797354 Neighboring gene uncharacterized LOC106686324 Neighboring gene activating signal cointegrator 1 complex subunit 1 Neighboring gene endoplasmic reticulum-Golgi intermediate compartment protein 2 Neighboring gene profilin chic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Rapid transcriptome sequencing of an invasive pest, the brown marmorated stink bug Halyomorpha halys. Ioannidis P, et al. BMC Genomics, 2014 Aug 29. PMID 25168586, Free PMC Article
  2. Transcriptome of the invasive brown marmorated stink bug, Halyomorpha halys (Stål) (Heteroptera: Pentatomidae). Sparks ME, et al. PLoS One, 2014. PMID 25386688, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic initiation factor 4A-I

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000696795.3-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Hhal_1.1 Primary Assembly

Genomic

  1. NW_027106137.1 Reference Hhal_1.1 Primary Assembly

    Range
    637252..649936 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014429648.3 → XP_014285134.1  eukaryotic initiation factor 4A-I isoform X2

    Related
    XP_014285134.1
    Conserved Domains (3) summary
    PTZ00424
    Location:14 → 414
    PTZ00424; helicase 45; Provisional
    cd00268
    Location:43 → 243
    DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
    pfam00271
    Location:265 → 369
    Helicase_C; Helicase conserved C-terminal domain

  2. XM_014429639.3 → XP_014285125.1  eukaryotic initiation factor 4A-I isoform X1

    Related
    XP_014285125.1
    Conserved Domains (3) summary
    PTZ00424
    Location:22 → 422
    PTZ00424; helicase 45; Provisional
    cd00268
    Location:51 → 251
    DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
    pfam00271
    Location:273 → 377
    Helicase_C; Helicase conserved C-terminal domain
Nucleotide Protein
Heading Accession and Version

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