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LOC106674446 carotenoid isomerooxygenase-like [ Cimex lectularius (bed bug) ]

Gene ID: 106674446, updated on 28-Mar-2024

Summary

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Gene symbol
LOC106674446
Gene description
carotenoid isomerooxygenase-like
See related
VectorBase:LOC106674446; EnsemblRapid:LOC106674446
Gene type
protein coding
RefSeq status
MODEL
Organism
Cimex lectularius
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Heteroptera; Panheteroptera; Cimicomorpha; Cimicidae; Cimex
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Genomic context

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See LOC106674446 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Clec_2.1 (GCF_000648675.2) Unplaced Scaffold NW_019392882.1 (604734..628346)
100 previous assembly Clec_1.0 (GCF_000648675.1) Unplaced Scaffold NW_014465020.1 (7084265..7088792)

NW_019392882.1Genomic Context describing neighboring genes Neighboring gene lachesin-like Neighboring gene uncharacterized LOC106660794 Neighboring gene uncharacterized LOC106674449 Neighboring gene trypsin theta-like Neighboring gene uncharacterized LOC106674330 Neighboring gene uncharacterized LOC112127695 Neighboring gene transmembrane protein 104 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carotenoid isomerooxygenase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cimex lectularius Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Clec_2.1 Primary Assembly

Genomic

  1. NW_019392882.1 Reference Clec_2.1 Primary Assembly

    Range
    604734..628346
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014407172.2 → XP_014262658.2  carotenoid isomerooxygenase-like

    UniProtKB/TrEMBL
    A0A8I6SR66
    Related
    XP_014262658.2, XM_014407172.2
    Conserved Domains (1) summary
    pfam03055
    Location:92 → 586
    RPE65; Retinal pigment epithelial membrane protein
Nucleotide Protein Strain
Heading Accession and Version

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