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LOC106606700 heparan sulfate glucosamine 3-O-sulfotransferase 6 [ Salmo salar (Atlantic salmon) ]

Gene ID: 106606700, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106606700
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 6
See related
Ensembl:ENSSSAG00000042140
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC106606700 in Genome Data Viewer
Location:
chromosome: ssa06
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa06 NC_059447.1 (22776576..22804703)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa06 NC_027305.1 (18229027..18259687, complement)

Chromosome ssa06 - NC_059447.1Genomic Context describing neighboring genes Neighboring gene methionine-R-sulfoxide reductase B1-A Neighboring gene uncharacterized LOC106606704 Neighboring gene hydroxyacylglutathione hydrolase, mitochondrial Neighboring gene fumarylacetoacetate hydrolase domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059447.1 Reference Ssal_v3.1

    Range
    22776576..22804703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045719974.1 → XP_045575930.1  heparan sulfate glucosamine 3-O-sulfotransferase 6

    Related
    ENSSSAP00000035387.2, ENSSSAT00000061051.2
Nucleotide Protein
Heading Accession and Version

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