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LOC106602034 pulmonary surfactant-associated protein D-like [ Salmo salar (Atlantic salmon) ]

Gene ID: 106602034, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106602034
Gene description
pulmonary surfactant-associated protein D-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC106602034 in Genome Data Viewer
Location:
chromosome: ssa03
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa03 NC_059444.1 (91526444..91532676)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa03 NC_027302.1 (90341722..90343195)

Chromosome ssa03 - NC_059444.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123741743 Neighboring gene mannose-binding protein-like Neighboring gene peripheral myelin protein 22 Neighboring gene toll-like receptor 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein-like; pulmonary surfactant-associated protein D-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059444.1 Reference Ssal_v3.1

    Range
    91526444..91532676
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045715767.1 → XP_045571723.1  pulmonary surfactant-associated protein D-like isoform X1

  2. XM_045715769.1 → XP_045571725.1  pulmonary surfactant-associated protein D-like isoform X3

  3. XM_045715768.1 → XP_045571724.1  mannose-binding protein-like isoform X2

  4. XM_045715770.1 → XP_045571726.1  mannose-binding protein-like isoform X4

Nucleotide Protein
Heading Accession and Version

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