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b3gnt2b UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [ Salmo salar (Atlantic salmon) ]

Gene ID: 106600605, updated on 13-Mar-2024

Summary

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Gene symbol
b3gnt2b
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
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Genomic context

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See b3gnt2b in Genome Data Viewer
Location:
chromosome: ssa18
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) Unplaced Scaffold NW_025550944.1 (803296..831321)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa03 NC_027302.1 (42169198..42213307)

NW_025550944.1Genomic Context describing neighboring genes Neighboring gene protein FAM161A-like Neighboring gene uncharacterized LOC106577331 Neighboring gene uncharacterized LOC106600614

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NW_025550944.1 Reference Ssal_v3.1

    Range
    803296..831321
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045714159.1 → XP_045570115.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases