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LOC106589822 chitin synthase chs-2-like [ Salmo salar (Atlantic salmon) ]

Gene ID: 106589822, updated on 26-Jun-2024

Summary

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Gene symbol
LOC106589822
Gene description
chitin synthase chs-2-like
See related
Ensembl:ENSSSAG00000056440
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC106589822 in Genome Data Viewer
Location:
chromosome: ssa28
Exon count:
19
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa28 NC_059469.1 (28820914..28838185, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa28 NC_027327.1 (28107813..28124821, complement)

Chromosome ssa28 - NC_059469.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase alpha-2 Neighboring gene mitochondrial pyruvate carrier 1 Neighboring gene Membrane-spanning 4-domains subfamily A member 15 Neighboring gene myoneurin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitin synthase chs-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059469.1 Reference Ssal_v3.1

    Range
    28820914..28838185 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014180200.2 → XP_014035675.2  chitin synthase chs-2-like isoform X2

    Related
    ENSSSAP00000061751.2, ENSSSAT00000091748.2

  2. XM_014180199.2 → XP_014035674.2  chitin synthase chs-2-like isoform X1

    Related
    ENSSSAP00000061743.2, ENSSSAT00000091740.2
Nucleotide Protein
Heading Accession and Version

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