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b3gat1a beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) a [ Salmo salar (Atlantic salmon) ]

Gene ID: 106581230, updated on 13-Mar-2024

Summary

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Gene symbol
b3gat1a
Gene description
beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) a
See related
Ensembl:ENSSSAG00000054748
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
zebrafish all
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Genomic context

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See b3gat1a in Genome Data Viewer
Location:
chromosome: ssa20
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa20 NC_059461.1 (69631302..69740874, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa20 NC_027319.1 (63824297..63933941, complement)

Chromosome ssa20 - NC_059461.1Genomic Context describing neighboring genes Neighboring gene beta-galactosidase-1-like protein 2 Neighboring gene beta-galactosidase-1-like protein 2 Neighboring gene ilvB (bacterial acetolactate synthase)-like Neighboring gene sialate O-acetylesterase Neighboring gene sialic acid acetylesterase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059461.1 Reference Ssal_v3.1

    Range
    69631302..69740874 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014163149.2 → XP_014018624.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1S3NT74
    Conserved Domains (1) summary
    cd00218
    Location:109 → 341
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis

  2. XM_014163148.2 → XP_014018623.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A1S3NT74
    Related
    ENSSSAP00000057844.1, ENSSSAT00000087527.2
    Conserved Domains (1) summary
    cd00218
    Location:109 → 341
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis

  3. XM_014163150.2 → XP_014018625.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A1S3NTP4
    Related
    ENSSSAP00000057834.2, ENSSSAT00000087517.2
    Conserved Domains (1) summary
    cd00218
    Location:85 → 317
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis
Nucleotide Protein
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