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b3gat3 beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [ Salmo salar (Atlantic salmon) ]

Gene ID: 106578098, updated on 13-Mar-2024

Summary

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Gene symbol
b3gat3
Gene description
beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
See related
Ensembl:ENSSSAG00000043243
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
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Genomic context

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See b3gat3 in Genome Data Viewer
Location:
chromosome: ssa18
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa18 NC_059459.1 (78349958..78355287)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa18 NC_027317.1 (66508023..66512766, complement)

Chromosome ssa18 - NC_059459.1Genomic Context describing neighboring genes Neighboring gene REST corepressor 2 Neighboring gene N-alpha-acetyltransferase 40, NatD catalytic subunit Neighboring gene uncharacterized LOC106578097 Neighboring gene mucin-3A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059459.1 Reference Ssal_v3.1

    Range
    78349958..78355287
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014156691.2 → XP_014012166.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A1S3NAM8
    Related
    ENSSSAP00000037917.2, ENSSSAT00000063774.2
    Conserved Domains (1) summary
    cd00218
    Location:81 → 314
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis

  2. XM_045700546.1 → XP_045556502.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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