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LOC106577690 UDP-glucuronosyltransferase 1-2-like [ Salmo salar (Atlantic salmon) ]

Gene ID: 106577690, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106577690
Gene description
UDP-glucuronosyltransferase 1-2-like
See related
Ensembl:ENSSSAG00000065510
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC106577690 in Genome Data Viewer
Location:
chromosome: ssa18
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa18 NC_059459.1 (65328344..65341508, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa18 NC_027317.1 (55034675..55047838, complement)

Chromosome ssa18 - NC_059459.1Genomic Context describing neighboring genes Neighboring gene prostaglandin D2 receptor 2 Neighboring gene probable G-protein coupled receptor 132 Neighboring gene UDP-glucuronosyltransferase 2B31-like Neighboring gene placenta-specific gene 8 protein-like Neighboring gene cornifelin homolog B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucuronosyltransferase 1-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059459.1 Reference Ssal_v3.1

    Range
    65328344..65341508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045701401.1 → XP_045557357.1  UDP-glucuronosyltransferase 1-2-like isoform X2

    UniProtKB/TrEMBL
    A0A1S3N7U4
    Related
    ENSSSAP00000145718.1, ENSSSAT00000216824.1
    Conserved Domains (1) summary
    cl10013
    Location:35 → 504
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  2. XM_014156017.2 → XP_014011492.1  UDP-glucuronosyltransferase 1-2-like isoform X2

    UniProtKB/TrEMBL
    A0A1S3N7U4
    Related
    ENSSSAP00000076326.2, ENSSSAT00000109768.2
    Conserved Domains (1) summary
    cl10013
    Location:35 → 504
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  3. XM_014156016.2 → XP_014011491.1  UDP-glucuronosyltransferase 1-2-like isoform X1

    UniProtKB/TrEMBL
    A0A1S3N8T1
    Related
    ENSSSAP00000165288.1, ENSSSAT00000167304.1
    Conserved Domains (2) summary
    PHA03392
    Location:218 → 515
    egt; ecdysteroid UDP-glucosyltransferase; Provisional
    pfam00201
    Location:47 → 516
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase
Nucleotide Protein
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