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LOC106575442 glycogenin-1-like [ Salmo salar (Atlantic salmon) ]

Gene ID: 106575442, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106575442
Gene description
glycogenin-1-like
See related
Ensembl:ENSSSAG00000087097
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC106575442 in Genome Data Viewer
Location:
chromosome: ssa17
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa17 NC_059458.1 (20263769..20273245, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa17 NC_027316.1 (15785896..15797950, complement)

Chromosome ssa17 - NC_059458.1Genomic Context describing neighboring genes Neighboring gene plastin-1 Neighboring gene serine/threonine-protein kinase PAK 2 Neighboring gene arabinogalactan protein 1-like Neighboring gene transfer RNA serine (anticodon AGA) Neighboring gene transfer RNA leucine (anticodon CAG)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogenin-1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059458.1 Reference Ssal_v3.1

    Range
    20263769..20273245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014151939.2 → XP_014007414.1  glycogenin-1-like isoform X1

    UniProtKB/TrEMBL
    A0A1S3MW59
    Related
    ENSSSAP00000159482.1, ENSSSAT00000163866.1
    Conserved Domains (1) summary
    cd02537
    Location:4 → 255
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. XM_014151940.2 → XP_014007415.1  glycogenin-1-like isoform X2

    UniProtKB/TrEMBL
    A0A1S3MWD1
    Conserved Domains (1) summary
    cd02537
    Location:1 → 206
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
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