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fktn fukutin [ Salmo salar (Atlantic salmon) ]

Gene ID: 106572724, updated on 13-Mar-2024

Summary

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Gene symbol
fktn
Gene description
fukutin
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
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Genomic context

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See fktn in Genome Data Viewer
Location:
chromosome: ssa01
Exon count:
12
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa01 NC_059442.1 (171615232..171636143)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa01 NC_027300.1 (157934101..157952913)

Chromosome ssa01 - NC_059442.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat-containing protein 19-like Neighboring gene fibronectin type III and SPRY domain containing 1-like Neighboring gene YTH N6-methyladenosine RNA binding protein C1 Neighboring gene dnaJ homolog subfamily C member 25-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fukutin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059442.1 Reference Ssal_v3.1

    Range
    171615232..171636143
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045694133.1 → XP_045550089.1  fukutin isoform X2

  2. XM_014147174.2 → XP_014002649.1  fukutin isoform X1

    UniProtKB/TrEMBL
    A0A1S3MHG8
    Conserved Domains (2) summary
    cl00296
    Location:122 → 182
    Peptidase_C39_like; Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria. The cysteine peptidases in family C39 cleave the "double-glycine" leader peptides from the precursors of various bacteriocins (mostly non-lantibiotic). The cleavage ...
    cl01378
    Location:291 → 324
    LicD; LicD family

  3. XM_014147157.2 → XP_014002632.1  fukutin isoform X1

    UniProtKB/TrEMBL
    A0A1S3MHG8
    Conserved Domains (2) summary
    cl00296
    Location:122 → 182
    Peptidase_C39_like; Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria. The cysteine peptidases in family C39 cleave the "double-glycine" leader peptides from the precursors of various bacteriocins (mostly non-lantibiotic). The cleavage ...
    cl01378
    Location:291 → 324
    LicD; LicD family

  4. XM_014147167.2 → XP_014002642.1  fukutin isoform X1

    UniProtKB/TrEMBL
    A0A1S3MHG8
    Conserved Domains (2) summary
    cl00296
    Location:122 → 182
    Peptidase_C39_like; Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria. The cysteine peptidases in family C39 cleave the "double-glycine" leader peptides from the precursors of various bacteriocins (mostly non-lantibiotic). The cleavage ...
    cl01378
    Location:291 → 324
    LicD; LicD family

  5. XM_045694126.1 → XP_045550082.1  fukutin isoform X1

    UniProtKB/TrEMBL
    A0A1S3MHG8
    Conserved Domains (2) summary
    cl00296
    Location:122 → 182
    Peptidase_C39_like; Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria. The cysteine peptidases in family C39 cleave the "double-glycine" leader peptides from the precursors of various bacteriocins (mostly non-lantibiotic). The cleavage ...
    cl01378
    Location:291 → 324
    LicD; LicD family
Nucleotide Protein
Heading Accession and Version

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