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LOC106568735 beta-1,3-galactosyltransferase 2-like [ Salmo salar (Atlantic salmon) ]

Gene ID: 106568735, updated on 6-Jun-2024

Summary

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Gene symbol
LOC106568735
Gene description
beta-1,3-galactosyltransferase 2-like
See related
Ensembl:ENSSSAG00000111513
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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Location:
chromosome: ssa14
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa14 NC_059455.1 (9584682..9628316, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa14 NC_027313.1 (9451643..9496385, complement)

Chromosome ssa14 - NC_059455.1Genomic Context describing neighboring genes Neighboring gene regulator of G-protein signaling 21-like Neighboring gene regulator of G-protein signaling 21-like Neighboring gene cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) Neighboring gene potassium channel subfamily T member 2 Neighboring gene protein crumbs homolog 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. Ramberg S, et al. Front Genet, 2021. PMID 33986770, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059455.1 Reference Ssal_v3.1

    Range
    9584682..9628316 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014139330.2 → XP_013994805.2  beta-1,3-galactosyltransferase 2-like

    UniProtKB/TrEMBL
    A0A1S3LVD7
    Related
    ENSSSAP00000135022.1, ENSSSAT00000244804.1

  2. XM_014139331.2 → XP_013994806.2  beta-1,3-galactosyltransferase 2-like

    UniProtKB/TrEMBL
    A0A1S3LVD7
    Related
    ENSSSAP00000171148.1, ENSSSAT00000160522.1

  3. XM_014139328.2 → XP_013994803.2  beta-1,3-galactosyltransferase 2-like

    UniProtKB/TrEMBL
    A0A1S3LVD7
    Related
    ENSSSAP00000121626.1, ENSSSAT00000220524.1
Nucleotide Protein
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