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tomm6 translocase of outer mitochondrial membrane 6 homolog (yeast) [ Salmo salar (Atlantic salmon) ]

Gene ID: 106565357, updated on 13-Mar-2024

Summary

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Gene symbol
tomm6
Gene description
translocase of outer mitochondrial membrane 6 homolog (yeast)
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Also known as
OBTP
Orthologs
human zebrafish all
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Genomic context

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See tomm6 in Genome Data Viewer
Location:
chromosome: ssa12
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa12 NC_059453.1 (57964281..57965338, complement)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa12 NC_027311.1 (50106016..50107145, complement)

Chromosome ssa12 - NC_059453.1Genomic Context describing neighboring genes Neighboring gene PBP2_transferrin domain-containing protein Neighboring gene NAD-dependent protein lipoamidase sirtuin-4, mitochondrial Neighboring gene ubiquinol-cytochrome-c reductase complex assembly factor 2 Neighboring gene translocator protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome. Leong JS, et al. BMC Genomics, 2010 Apr 30. PMID 20433749, Free PMC Article
  2. A de novo Full-Length mRNA Transcriptome Generated From Hybrid-Corrected PacBio Long-Reads Improves the Transcript Annotation and Identifies Thousands of Novel Splice Variants in Atlantic Salmon. Ramberg S, et al. Front Genet, 2021. PMID 33986770, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of mitochondrial outer membrane translocase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial import receptor subunit TOM6 homolog
Names
Overexpressed breast tumor protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059453.1 Reference Ssal_v3.1

    Range
    57964281..57965338 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014132369.2 → XP_013987844.1  mitochondrial import receptor subunit TOM6 homolog

    UniProtKB/TrEMBL
    B5X5F3, B5XC06
    Conserved Domains (1) summary
    pfam15184
    Location:2 → 66
    TOM6p; Mitochondrial import receptor subunit TOM6 homolog
Nucleotide Protein
Heading Accession and Version

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