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LOC106564859 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [ Salmo salar (Atlantic salmon) ]

Gene ID: 106564859, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106564859
Gene description
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC106564859 in Genome Data Viewer
Location:
chromosome: ssa12
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa12 NC_059453.1 (34283767..34299783)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa12 NC_027311.1 (26264273..26280284)

Chromosome ssa12 - NC_059453.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106564862 Neighboring gene TsetseEP Neighboring gene copper metabolism (Murr1) domain containing 1 Neighboring gene uncharacterized LOC106564991 Neighboring gene homeobox protein OTX1 B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059453.1 Reference Ssal_v3.1

    Range
    34283767..34299783
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014131326.2 → XP_013986801.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A1S3L8K5
    Conserved Domains (1) summary
    cl21608
    Location:159 → 348
    Galactosyl_T; Galactosyltransferase

  2. XM_014131327.2 → XP_013986802.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A1S3L8K5
    Conserved Domains (1) summary
    cl21608
    Location:159 → 348
    Galactosyl_T; Galactosyltransferase

  3. XM_014131329.2 → XP_013986804.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A1S3L8K5
    Conserved Domains (1) summary
    cl21608
    Location:159 → 348
    Galactosyl_T; Galactosyltransferase

  4. XM_014131328.2 → XP_013986803.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A1S3L8K5
    Conserved Domains (1) summary
    cl21608
    Location:159 → 348
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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