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LOC106560502 torsin-1A-interacting protein 2-like [ Salmo salar (Atlantic salmon) ]

Gene ID: 106560502, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106560502
Gene description
torsin-1A-interacting protein 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC106560502 in Genome Data Viewer
Location:
chromosome: ssa10
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa10 NC_059451.1 (52446520..52455656)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa10 NC_027309.1 (43433309..43442447)

Chromosome ssa10 - NC_059451.1Genomic Context describing neighboring genes Neighboring gene torsin-1A-interacting protein 2 Neighboring gene uncharacterized LOC123724425 Neighboring gene olfactomedin-like 2Ba Neighboring gene activating transcription factor 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059451.1 Reference Ssal_v3.1

    Range
    52446520..52455656
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014123467.2 → XP_013978942.1  torsin-1A-interacting protein 2-like

    UniProtKB/TrEMBL
    A0A1S3KK08
    Conserved Domains (1) summary
    pfam16058
    Location:177 → 275
    Mucin-like; Mucin-like
Nucleotide Protein
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