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LOC106560189 enkurin domain-containing protein 1-like [ Canis lupus familiaris (dog) ]

Gene ID: 106560189, updated on 22-Jan-2024

Summary

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Gene symbol
LOC106560189
Gene description
enkurin domain-containing protein 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

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See LOC106560189 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
1
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 21 NC_051825.1 (34159772..34160777)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 21 NC_006603.4 (32848004..32849009)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 21 NC_049242.1 (33883368..33884373)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 21 NC_049281.1 (33421435..33422717)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 21 NC_049762.1 (33590715..33591720)

Chromosome 21 - NC_051825.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(I) chain-like Neighboring gene SET binding factor 2 Neighboring gene uncharacterized LOC111091555 Neighboring gene 26S proteasome non-ATPase regulatory subunit 9-like Neighboring gene uncharacterized LOC119865007 Neighboring gene keratin, type II cytoskeletal 8-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasmic microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: enkurin domain-containing protein 1-like; enkurin domain-containing protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051825.1 Reference ROS_Cfam_1.0

    Range
    34159772..34160777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038430493.1 → XP_038286421.1  enkurin domain-containing protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A8C0KPM1, A0A8C0KXL7
    Conserved Domains (1) summary
    pfam13864
    Location:243 → 306
    Enkurin; Calmodulin-binding

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049281.1 Alternate UMICH_Zoey_3.1

    Range
    33421435..33422717
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038505796.1 → XP_038361724.1  LOW QUALITY PROTEIN: enkurin domain-containing protein 1-like isoform X2

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049762.1 Alternate UNSW_CanFamBas_1.0

    Range
    33590715..33591720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038633209.1 → XP_038489137.1  enkurin domain-containing protein 1-like isoform X1

    Conserved Domains (1) summary
    pfam13864
    Location:243 → 306
    Enkurin; Calmodulin-binding

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049242.1 Alternate UU_Cfam_GSD_1.0

    Range
    33883368..33884373
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038569030.1 → XP_038424958.1  enkurin domain-containing protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A8C0KPM1, A0A8C0KXL7
    Conserved Domains (1) summary
    pfam13864
    Location:243 → 306
    Enkurin; Calmodulin-binding

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006603.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    32848004..32849009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038456466.1 → XP_038312394.1  enkurin domain-containing protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A8C0KPM1, A0A8C0KXL7
    Conserved Domains (1) summary
    pfam13864
    Location:243 → 306
    Enkurin; Calmodulin-binding
Nucleotide Protein
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