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LOC106560154 60S ribosomal protein L17-like [ Canis lupus familiaris (dog) ]

Gene ID: 106560154, updated on 22-Jan-2024

Summary

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Gene symbol
LOC106560154
Gene description
60S ribosomal protein L17-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

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See LOC106560154 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 21 NC_051825.1 (34373528..34432972)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 21 NC_006603.4 (33061719..33121277)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 21 NC_049242.1 (34097632..34156944)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 21 NC_049281.1 (33635277..33694628)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 21 NC_049762.1 (33805044..33864350)

Chromosome 21 - NC_051825.1Genomic Context describing neighboring genes Neighboring gene SET binding factor 2 Neighboring gene protein S100-A6-like Neighboring gene translationally-controlled tumor protein-like Neighboring gene adrenomedullin Neighboring gene uncharacterized LOC119865010 Neighboring gene uncharacterized LOC119865009 Neighboring gene adenosine monophosphate deaminase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L17-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051825.1 Reference ROS_Cfam_1.0

    Range
    34373528..34432972
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038430511.1 → XP_038286439.1  60S ribosomal protein L17-like

    UniProtKB/TrEMBL
    A0A8C0MK32, A0A8C0R9Y9
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  2. XM_038430512.1 → XP_038286440.1  60S ribosomal protein L17-like

    UniProtKB/TrEMBL
    A0A8C0MK32, A0A8C0R9Y9
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  3. XM_038430513.1 → XP_038286441.1  60S ribosomal protein L17-like

    UniProtKB/TrEMBL
    A0A8C0MK32, A0A8C0R9Y9
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  4. XM_038430510.1 → XP_038286438.1  60S ribosomal protein L17-like

    UniProtKB/TrEMBL
    A0A8C0MK32, A0A8C0R9Y9
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

RNA

  1. XR_005298769.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049281.1 Alternate UMICH_Zoey_3.1

    Range
    33635277..33694628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038505804.1 → XP_038361732.1  60S ribosomal protein L17-like

    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  2. XM_038505805.1 → XP_038361733.1  60S ribosomal protein L17-like

    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  3. XM_038505806.1 → XP_038361734.1  60S ribosomal protein L17-like

    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  4. XM_038505803.1 → XP_038361731.1  60S ribosomal protein L17-like

    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

RNA

  1. XR_005341967.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049762.1 Alternate UNSW_CanFamBas_1.0

    Range
    33805044..33864350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038633217.1 → XP_038489145.1  60S ribosomal protein L17-like

    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  2. XM_038633218.1 → XP_038489146.1  60S ribosomal protein L17-like

    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  3. XM_038633219.1 → XP_038489147.1  60S ribosomal protein L17-like

    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  4. XM_038633216.1 → XP_038489144.1  60S ribosomal protein L17-like

    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

RNA

  1. XR_005409701.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049242.1 Alternate UU_Cfam_GSD_1.0

    Range
    34097632..34156944
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038569038.1 → XP_038424966.1  60S ribosomal protein L17-like

    UniProtKB/TrEMBL
    A0A8C0MK32, A0A8C0R9Y9
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  2. XM_038569040.1 → XP_038424968.1  60S ribosomal protein L17-like

    UniProtKB/TrEMBL
    A0A8C0MK32, A0A8C0R9Y9
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  3. XM_038569039.1 → XP_038424967.1  60S ribosomal protein L17-like

    UniProtKB/TrEMBL
    A0A8C0MK32, A0A8C0R9Y9
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  4. XM_038569041.1 → XP_038424969.1  60S ribosomal protein L17-like

    UniProtKB/TrEMBL
    A0A8C0MK32, A0A8C0R9Y9
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  5. XM_038569037.1 → XP_038424965.1  60S ribosomal protein L17-like

    UniProtKB/TrEMBL
    A0A8C0MK32, A0A8C0R9Y9
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

RNA

  1. XR_005375740.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006603.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    33061719..33121277
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038456458.1 → XP_038312386.1  60S ribosomal protein L17-like

    UniProtKB/TrEMBL
    A0A8C0MK32, A0A8C0R9Y9
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  2. XM_038456459.1 → XP_038312387.1  60S ribosomal protein L17-like

    UniProtKB/TrEMBL
    A0A8C0MK32, A0A8C0R9Y9
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  3. XM_038456460.1 → XP_038312388.1  60S ribosomal protein L17-like

    UniProtKB/TrEMBL
    A0A8C0MK32, A0A8C0R9Y9
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

  4. XM_038456457.1 → XP_038312385.1  60S ribosomal protein L17-like

    UniProtKB/TrEMBL
    A0A8C0MK32, A0A8C0R9Y9
    Conserved Domains (1) summary
    PTZ00178
    Location:1 → 165
    PTZ00178; 60S ribosomal protein L17; Provisional

RNA

  1. XR_005313191.1 RNA Sequence

Nucleotide Protein
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