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ZNF865 zinc finger protein 865 [ Canis lupus familiaris (dog) ]

Gene ID: 106557515, updated on 17-Aug-2024

Summary

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Official Symbol
ZNF865provided by VGNC
Official Full Name
zinc finger protein 865provided by VGNC
Primary source
VGNC:VGNC:48833
See related
Ensembl:ENSCAFG00845000576
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See ZNF865 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (102774938..102785901, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (102178526..102189485, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (102887705..102898668, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (102412482..102423443, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (102124319..102135279, complement)

Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 580 Neighboring gene zinc finger protein 784 Neighboring gene zinc finger protein 524 Neighboring gene FLT3 interacting zinc finger 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: zinc finger protein 865; zinc finger protein 865

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051805.1 Reference ROS_Cfam_1.0

    Range
    102774938..102785901 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038655683.1 → XP_038511611.1  zinc finger protein 865

    UniProtKB/TrEMBL
    A0A8C0KQG3, A0A8C0QPX0, A0A8I3MI62
    Related
    ENSCAFP00845000691.1, ENSCAFT00845000922.1
    Conserved Domains (2) summary
    COG5048
    Location:353 → 631
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:555 → 575
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049261.1 Alternate UMICH_Zoey_3.1

    Range
    102412482..102423443 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038466890.1 → XP_038322818.1  zinc finger protein 865

    Conserved Domains (2) summary
    COG5048
    Location:353 → 631
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:555 → 575
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

    Range
    102124319..102135279 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038592007.1 → XP_038447935.1  LOW QUALITY PROTEIN: zinc finger protein 865

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

    Range
    102887705..102898668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038527708.1 → XP_038383636.1  zinc finger protein 865

    UniProtKB/TrEMBL
    A0A8C0KQG3, A0A8C0QPX0, A0A8I3MI62
    Conserved Domains (2) summary
    COG5048
    Location:353 → 631
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:555 → 575
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    102178526..102189485 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014118223.3 → XP_013973698.1  zinc finger protein 865

    UniProtKB/TrEMBL
    A0A8C0KQG3, A0A8C0QPX0, A0A8I3MI62
    Conserved Domains (2) summary
    COG5048
    Location:353 → 631
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:555 → 575
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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