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KIRREL3 kirre like nephrin family adhesion molecule 3 [ Thamnophis sirtalis ]

Gene ID: 106553873, updated on 13-Mar-2024

Summary

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Gene symbol
KIRREL3
Gene description
kirre like nephrin family adhesion molecule 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See KIRREL3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013660123.1 (1722..92947, complement)

NW_013660123.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013660123.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3
Names
kin of IRRE like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013660123.1 Reference Thamnophis_sirtalis-6.0

    Range
    1722..92947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014072455.1 → XP_013927930.1  kin of IRRE-like protein 3

    UniProtKB/TrEMBL
    A0A6I9YWF2
    Conserved Domains (5) summary
    cd05898
    Location:186 → 283
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00408
    Location:117 → 168
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:194 → 283
    IG_like; Immunoglobulin like
    pfam07679
    Location:103 → 184
    I-set; Immunoglobulin I-set domain
    pfam13895
    Location:22 → 99
    Ig_2; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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