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ALG1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase [ Thamnophis sirtalis ]

Gene ID: 106549573, updated on 13-Mar-2024

Summary

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Gene symbol
ALG1
Gene description
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Orthologs
human mouse all
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Genomic context

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See ALG1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013659020.1 (115038..140802, complement)

NW_013659020.1Genomic Context describing neighboring genes Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase family member 7-like Neighboring gene eukaryotic elongation factor 2 lysine methyltransferase Neighboring gene uncharacterized LOC106549575 Neighboring gene uncharacterized LOC106549565 Neighboring gene WD repeat-containing protein 90-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013659020.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitobiosyldiphosphodolichol beta-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013659020.1 Reference Thamnophis_sirtalis-6.0

    Range
    115038..140802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014067267.1 → XP_013922742.1  chitobiosyldiphosphodolichol beta-mannosyltransferase

    UniProtKB/TrEMBL
    A0A6I9YEZ8
    Conserved Domains (2) summary
    cd03816
    Location:39 → 466
    GT1_ALG1_like; This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and ...
    PLN02275
    Location:38 → 429
    PLN02275; transferase, transferring glycosyl groups
Nucleotide Protein
Heading Accession and Version

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