U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CHGA chromogranin A [ Thamnophis sirtalis ]

Gene ID: 106549452, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CHGA
Gene description
chromogranin A
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CHGA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013658998.1 (39830..63470)

NW_013658998.1Genomic Context describing neighboring genes Neighboring gene polyglutamine binding protein 1 Neighboring gene inositol-tetrakisphosphate 1-kinase Neighboring gene tetratricopeptide repeat protein 30A-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_013658998.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway involved in cardiac muscle relaxation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of catecholamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of insulin secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromaffin granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
chromogranin-A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013658998.1 Reference Thamnophis_sirtalis-6.0

    Range
    39830..63470
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014067108.1 → XP_013922583.1  chromogranin-A isoform X2

    UniProtKB/TrEMBL
    A0A6I9YEH9
    Conserved Domains (1) summary
    pfam01271
    Location:29 → 401
    Granin; Granin (chromogranin or secretogranin)

  2. XM_014067107.1 → XP_013922582.1  chromogranin-A isoform X1

    UniProtKB/TrEMBL
    A0A6I9YEI8
    Conserved Domains (1) summary
    pfam01271
    Location:29 → 468
    Granin; Granin (chromogranin or secretogranin)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.