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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Thamnophis sirtalis ]

Gene ID: 106540364, updated on 13-Mar-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Also known as
KIRREL
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013657960.1 (779315..809715)

NW_013657960.1Genomic Context describing neighboring genes Neighboring gene potassium inwardly rectifying channel subfamily J member 10 Neighboring gene SLAM family member 5-like Neighboring gene heat shock 70 kDa protein II-like Neighboring gene hemojuvelin BMP co-receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013657960.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1
Names
kin of IRRE like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013657960.1 Reference Thamnophis_sirtalis-6.0

    Range
    779315..809715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014055447.1 → XP_013910922.1  kin of IRRE-like protein 1

    UniProtKB/TrEMBL
    A0A6I9XAU4
    Conserved Domains (5) summary
    cd05898
    Location:394 → 491
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    smart00410
    Location:30 → 119
    IG_like; Immunoglobulin like
    pfam07679
    Location:311 → 392
    I-set; Immunoglobulin I-set domain
    pfam13895
    Location:314 → 392
    Ig_2; Immunoglobulin domain
    cl11960
    Location:141 → 222
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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