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cep104 centrosomal protein 104 [ Austrofundulus limnaeus ]

Gene ID: 106525990, updated on 13-Mar-2024

Summary

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Gene symbol
cep104
Gene description
centrosomal protein 104
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Orthologs
human zebrafish all
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Genomic context

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See cep104 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952653.1 (648389..679000, complement)

NW_013952653.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C1orf174 homolog Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, like Neighboring gene uncharacterized LOC106525979 Neighboring gene leucine rich repeat containing 47 Neighboring gene L-rhamnose-binding lectin CSL2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013952653.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 104 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952653.1 Reference Austrofundulus_limnaeus-1.0

    Range
    648389..679000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014020406.1 → XP_013875860.1  centrosomal protein of 104 kDa isoform X1

    UniProtKB/TrEMBL
    A0A2I4C7C5
    Conserved Domains (2) summary
    pfam13388
    Location:225 → 415
    DUF4106; Protein of unknown function (DUF4106)
    sd00044
    Location:487 → 515
    HEAT; HEAT repeat [structural motif]

  2. XM_014020410.1 → XP_013875864.1  centrosomal protein of 104 kDa isoform X4

    UniProtKB/TrEMBL
    A0A2I4C7D0
    Conserved Domains (2) summary
    pfam13388
    Location:189 → 379
    DUF4106; Protein of unknown function (DUF4106)
    sd00044
    Location:451 → 479
    HEAT; HEAT repeat [structural motif]

  3. XM_014020408.1 → XP_013875862.1  centrosomal protein of 104 kDa isoform X2

    UniProtKB/TrEMBL
    A0A2I4C787
    Conserved Domains (2) summary
    pfam17031
    Location:714 → 780
    DUF5101; Domain of unknown function (DUF5101)
    sd00044
    Location:487 → 515
    HEAT; HEAT repeat [structural motif]

  4. XM_014020405.1 → XP_013875859.1  centrosomal protein of 104 kDa isoform X1

    UniProtKB/TrEMBL
    A0A2I4C7C5
    Conserved Domains (2) summary
    pfam13388
    Location:225 → 415
    DUF4106; Protein of unknown function (DUF4106)
    sd00044
    Location:487 → 515
    HEAT; HEAT repeat [structural motif]

  5. XM_014020407.1 → XP_013875861.1  centrosomal protein of 104 kDa isoform X1

    UniProtKB/TrEMBL
    A0A2I4C7C5
    Conserved Domains (2) summary
    pfam13388
    Location:225 → 415
    DUF4106; Protein of unknown function (DUF4106)
    sd00044
    Location:487 → 515
    HEAT; HEAT repeat [structural motif]

  6. XM_014020409.1 → XP_013875863.1  centrosomal protein of 104 kDa isoform X3

    UniProtKB/TrEMBL
    A0A2I4C793
    Conserved Domains (2) summary
    pfam13388
    Location:225 → 415
    DUF4106; Protein of unknown function (DUF4106)
    sd00044
    Location:487 → 515
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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