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pomt2 protein-O-mannosyltransferase 2 [ Austrofundulus limnaeus ]

Gene ID: 106520384, updated on 13-Mar-2024

Summary

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Gene symbol
pomt2
Gene description
protein-O-mannosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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See pomt2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952404.1 (5543284..5551839, complement)

NW_013952404.1Genomic Context describing neighboring genes Neighboring gene visual system homeobox 2-like Neighboring gene lin-52 DREAM MuvB core complex component Neighboring gene latent transforming growth factor beta binding protein 2 Neighboring gene ribosomal protein S6 kinase-like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013952404.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952404.1 Reference Austrofundulus_limnaeus-1.0

    Range
    5543284..5551839 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014012462.1 → XP_013867916.1  protein O-mannosyl-transferase 2

    UniProtKB/TrEMBL
    A0A2I4BJL2
    Conserved Domains (4) summary
    smart00472
    Location:415 → 469
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:60 → 761
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:79 → 321
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:550 → 759
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase
Nucleotide Protein
Heading Accession and Version

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