U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

st8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [ Austrofundulus limnaeus ]

Gene ID: 106516261, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
st8sia5
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See st8sia5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952438.1 (1333293..1351646, complement)

NW_013952438.1Genomic Context describing neighboring genes Neighboring gene lipoxygenase homology domain-containing protein 1-like Neighboring gene lipoxygenase homology domain-containing protein 1-like Neighboring gene prostaglandin G/H synthase 1-like Neighboring gene ribosomal protein L37

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_013952438.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-2,8-sialyltransferase 8E

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952438.1 Reference Austrofundulus_limnaeus-1.0

    Range
    1333293..1351646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014006527.1 → XP_013861981.1  alpha-2,8-sialyltransferase 8E isoform X1

    UniProtKB/TrEMBL
    A0A2I4B2M3
    Conserved Domains (1) summary
    pfam00777
    Location:191 → 444
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_014006528.1 → XP_013861982.1  alpha-2,8-sialyltransferase 8E isoform X2

    UniProtKB/TrEMBL
    A0A2I4B2M9
    Conserved Domains (1) summary
    pfam00777
    Location:159 → 412
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_014006529.1 → XP_013861983.1  alpha-2,8-sialyltransferase 8E isoform X3

    UniProtKB/TrEMBL
    A0A2I4B2P2
    Conserved Domains (1) summary
    pfam00777
    Location:123 → 376
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.