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chst3a carbohydrate (chondroitin 6) sulfotransferase 3a [ Austrofundulus limnaeus ]

Gene ID: 106515361, updated on 13-Mar-2024

Summary

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Gene symbol
chst3a
Gene description
carbohydrate (chondroitin 6) sulfotransferase 3a
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Orthologs
human zebrafish all
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Genomic context

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See chst3a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952430.1 (2396198..2400720)

NW_013952430.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106515360 Neighboring gene cadherin-related family member 1a Neighboring gene uncharacterized LOC106515364 Neighboring gene paired box 2a Neighboring gene wingless-type MMTV integration site family, member 8b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013952430.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chondroitin 6-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952430.1 Reference Austrofundulus_limnaeus-1.0

    Range
    2396198..2400720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014005122.1 → XP_013860576.1  carbohydrate sulfotransferase 3-like

    UniProtKB/TrEMBL
    A0A2I4AYL1
    Conserved Domains (1) summary
    cl21551
    Location:220 → 408
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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