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CEP104 centrosomal protein 104 [ Sus scrofa (pig) ]

Gene ID: 106510608, updated on 13-Mar-2024

Summary

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Official Symbol
CEP104provided by VGNC
Official Full Name
centrosomal protein 104provided by VGNC
Primary source
VGNC:VGNC:86557
See related
Ensembl:ENSSSCG00000003362
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in kidney (RPKM 8.5), lung (RPKM 7.1) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See CEP104 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
21
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (65274092..65310735, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 6 NC_010448.3 (60132912..60157253, complement)

Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene small integral membrane protein 1 (Vel blood group) Neighboring gene leucine rich repeat containing 47 Neighboring gene uncharacterized LOC110261084 Neighboring gene microRNA mir-2320 Neighboring gene DNA fragmentation factor subunit beta Neighboring gene chromosome 6 C1orf174 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 104 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

    Range
    65274092..65310735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021095225.1 → XP_020950884.1  centrosomal protein of 104 kDa isoform X2

    UniProtKB/TrEMBL
    A0A287BFS6, A0A8D0PJ49, A0A8D0S0H8
    Conserved Domains (1) summary
    sd00044
    Location:483 → 511
    HEAT; HEAT repeat [structural motif]

  2. XM_021095230.1 → XP_020950889.1  centrosomal protein of 104 kDa isoform X7

    UniProtKB/TrEMBL
    A0A481B9P8, A0A8D1LG39
    Conserved Domains (1) summary
    sd00044
    Location:483 → 511
    HEAT; HEAT repeat [structural motif]

  3. XM_021095226.1 → XP_020950885.1  centrosomal protein of 104 kDa isoform X3

    UniProtKB/TrEMBL
    A0A8D0PJ49, A0A8D0S0H8
    Conserved Domains (1) summary
    sd00044
    Location:483 → 511
    HEAT; HEAT repeat [structural motif]

  4. XM_021095224.1 → XP_020950883.1  centrosomal protein of 104 kDa isoform X1

    UniProtKB/TrEMBL
    A0A8D0PJ49, A0A8D0S0H8, A0A8D1VSS8
    Conserved Domains (1) summary
    sd00044
    Location:483 → 511
    HEAT; HEAT repeat [structural motif]

  5. XM_021095229.1 → XP_020950888.1  centrosomal protein of 104 kDa isoform X6

    UniProtKB/TrEMBL
    A0A8D1LG39, A0A8D1Z7C5
    Conserved Domains (1) summary
    sd00044
    Location:483 → 511
    HEAT; HEAT repeat [structural motif]

  6. XM_021095227.1 → XP_020950886.1  centrosomal protein of 104 kDa isoform X4

    UniProtKB/TrEMBL
    A0A287AB33, A0A481AGN4, A0A481DCA9
    Related
    ENSSSCP00000041106.3, ENSSSCT00000046890.3
    Conserved Domains (1) summary
    sd00044
    Location:483 → 511
    HEAT; HEAT repeat [structural motif]

  7. XM_021095228.1 → XP_020950887.1  centrosomal protein of 104 kDa isoform X5

    UniProtKB/TrEMBL
    A0A480VIA0, A0A481B1Y5
    Conserved Domains (2) summary
    sd00044
    Location:483 → 511
    HEAT; HEAT repeat [structural motif]
    cl28267
    Location:678 → 744
    FimV; Tfp pilus assembly protein FimV [Cell motility, Extracellular structures]
Nucleotide Protein
Heading Accession and Version

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