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HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 [ Apteryx mantelli mantelli ]

Gene ID: 106498375, updated on 13-Mar-2024

Summary

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Gene symbol
HSD17B12
Gene description
hydroxysteroid 17-beta dehydrogenase 12
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli mantelli (sub-species: mantelli)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx; Apteryx mantelli
Orthologs
human mouse all
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Genomic context

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See HSD17B12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current AptMant0 (GCF_001039765.1) Unplaced Scaffold NW_014006077.1 (10520191..10583778, complement)

NW_014006077.1Genomic Context describing neighboring genes Neighboring gene 1-aminocyclopropane-1-carboxylate synthase-like protein 1 Neighboring gene alkB homolog 3, alpha-ketoglutarate dependent dioxygenase Neighboring gene uncharacterized LOC106498169 Neighboring gene tetratricopeptide repeat domain 17

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014006077.1 Unplaced Scaffold Reference AptMant0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain 3-oxoacyl-CoA reductase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx australis mantelli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AptMant0

Genomic

  1. NW_014006077.1 Reference AptMant0

    Range
    10520191..10583778 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013959602.1 → XP_013815056.1  very-long-chain 3-oxoacyl-CoA reductase

    UniProtKB/TrEMBL
    A0A8B7JVH7
    Conserved Domains (2) summary
    cd05356
    Location:9 → 243
    17beta-HSD1_like_SDR_c; 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs
    COG0300
    Location:9 → 256
    DltE; Short-chain dehydrogenase [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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