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ATP6V1A ATPase H+ transporting V1 subunit A [ Apteryx mantelli (North Island brown kiwi) ]

Gene ID: 106497259, updated on 28-Aug-2024

Summary

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Gene symbol
ATP6V1A
Gene description
ATPase H+ transporting V1 subunit A
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See ATP6V1A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_08 current bAptMan1.hap1 (GCF_036417845.1) 1 NC_089978.1 (133317704..133348926)

Chromosome 1 - NC_089978.1Genomic Context describing neighboring genes Neighboring gene upstream transcription factor family member 3 Neighboring gene N-alpha-acetyltransferase 50, NatE catalytic subunit Neighboring gene dual specificity phosphatase 12 Neighboring gene terminal nucleotidyltransferase 5C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089978.1 Chromosome 1 Reference bAptMan1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ATP metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase catalytic subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036417845.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAptMan1.hap1

Genomic

  1. NC_089978.1 Reference bAptMan1.hap1

    Range
    133317704..133348926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067302419.1 → XP_067158520.1  V-type proton ATPase catalytic subunit A isoform X1

  2. XM_013958135.2 → XP_013813589.1  V-type proton ATPase catalytic subunit A isoform X1

    UniProtKB/TrEMBL
    A0A8B7JS59
    Conserved Domains (1) summary
    TIGR01042
    Location:19 → 609
    V-ATPase_V1_A; V-type (H+)-ATPase V1, A subunit

  3. XM_067302426.1 → XP_067158527.1  V-type proton ATPase catalytic subunit A isoform X2

Nucleotide Protein
Heading Accession and Version

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