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VTCN1 V-set domain containing T cell activation inhibitor 1 [ Apteryx mantelli (North Island brown kiwi) ]

Gene ID: 106497218, updated on 21-Aug-2024

Summary

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Gene symbol
VTCN1
Gene description
V-set domain containing T cell activation inhibitor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See VTCN1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current bAptMan1.hap1 (GCF_036417845.1) 1 NC_089978.1 (133123006..133130000, complement)

Chromosome 1 - NC_089978.1Genomic Context describing neighboring genes Neighboring gene TNF receptor superfamily member 1A Neighboring gene CST telomere replication complex component 1 Neighboring gene tripartite motif containing 45 Neighboring gene spindle and centriole associated protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089978.1 Chromosome 1 Reference bAptMan1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in T cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: V-set domain-containing T-cell activation inhibitor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036417845.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAptMan1.hap1

Genomic

  1. NC_089978.1 Reference bAptMan1.hap1

    Range
    133123006..133130000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013958058.2 → XP_013813512.2  LOW QUALITY PROTEIN: V-set domain-containing T-cell activation inhibitor 1

Nucleotide Protein
Heading Accession and Version

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