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B3GALT6 beta-1,3-galactosyltransferase 6 [ Apteryx mantelli (North Island brown kiwi) ]

Gene ID: 106495555, updated on 28-Aug-2024

Summary

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Gene symbol
B3GALT6
Gene description
beta-1,3-galactosyltransferase 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See B3GALT6 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current bAptMan1.hap1 (GCF_036417845.1) 26 NC_090003.1 (4234131..4236723, complement)

Chromosome 26 - NC_090003.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 J2 Neighboring gene C1q and TNF related 12 Neighboring gene stromal cell derived factor 4 Neighboring gene TNF receptor superfamily member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090003.1 Chromosome 26 Reference bAptMan1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036417845.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAptMan1.hap1

Genomic

  1. NC_090003.1 Reference bAptMan1.hap1

    Range
    4234131..4236723 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013956050.1 → XP_013811504.1  beta-1,3-galactosyltransferase 6

    UniProtKB/TrEMBL
    A0A8B7JL80
    Conserved Domains (1) summary
    cl21608
    Location:90 → 278
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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