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CHID1 chitinase domain containing 1 [ Apteryx mantelli (North Island brown kiwi) ]

Gene ID: 106490091, updated on 28-Aug-2024

Summary

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Gene symbol
CHID1
Gene description
chitinase domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See CHID1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_08 current bAptMan1.hap1 (GCF_036417845.1) 4 NC_089981.1 (22504724..22631746, complement)

Chromosome 4 - NC_089981.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106490069 Neighboring gene tetraspanin 4 Neighboring gene uncharacterized LOC106490063 Neighboring gene uncharacterized LOC136992065 Neighboring gene adaptor related protein complex 2 subunit alpha 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089981.1 Chromosome 4 Reference bAptMan1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oligosaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitinase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036417845.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAptMan1.hap1

Genomic

  1. NC_089981.1 Reference bAptMan1.hap1

    Range
    22504724..22631746 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067295990.1 → XP_067152091.1  chitinase domain-containing protein 1

  2. XM_067295992.1 → XP_067152093.1  chitinase domain-containing protein 1

  3. XM_067295991.1 → XP_067152092.1  chitinase domain-containing protein 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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