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B4GALT2 beta-1,4-galactosyltransferase 2 [ Apteryx mantelli (North Island brown kiwi) ]

Gene ID: 106484931, updated on 28-Aug-2024

Summary

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Gene symbol
B4GALT2
Gene description
beta-1,4-galactosyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See B4GALT2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current bAptMan1.hap1 (GCF_036417845.1) 8 NC_089985.1 (30806311..30815818)

Chromosome 8 - NC_089985.1Genomic Context describing neighboring genes Neighboring gene diphthamide biosynthesis 2 Neighboring gene ATPase H+ transporting V0 subunit b Neighboring gene coiled-coil domain containing 24 Neighboring gene solute carrier family 6 member 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089985.1 Chromosome 8 Reference bAptMan1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036417845.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAptMan1.hap1

Genomic

  1. NC_089985.1 Reference bAptMan1.hap1

    Range
    30806311..30815818
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067301093.1 → XP_067157194.1  beta-1,4-galactosyltransferase 2

  2. XM_013943225.2 → XP_013798679.1  beta-1,4-galactosyltransferase 2

    UniProtKB/TrEMBL
    A0A8B7IK65
    Conserved Domains (1) summary
    cd00899
    Location:143 → 362
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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