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AGA aspartylglucosaminidase [ Apteryx mantelli (North Island brown kiwi) ]

Gene ID: 106484055, updated on 28-Aug-2024

Summary

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Gene symbol
AGA
Gene description
aspartylglucosaminidase
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See AGA in Genome Data Viewer
Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current bAptMan1.hap1 (GCF_036417845.1) 5 NC_089982.1 (47857735..47876672, complement)

Chromosome 5 - NC_089982.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136992261 Neighboring gene vascular endothelial growth factor C Neighboring gene uncharacterized LOC136992262 Neighboring gene nei like DNA glycosylase 3 Neighboring gene uncharacterized LOC106484023 Neighboring gene uncharacterized LOC136992192

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089982.1 Chromosome 5 Reference bAptMan1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables asparaginase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables beta-aspartyl-peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deglycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036417845.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAptMan1.hap1

Genomic

  1. NC_089982.1 Reference bAptMan1.hap1

    Range
    47857735..47876672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067297934.1 → XP_067154035.1  N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X1

  2. XM_013942155.2 → XP_013797609.1  N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X2

    UniProtKB/TrEMBL
    A0A8B7IIZ8
    Conserved Domains (1) summary
    cd04513
    Location:2 → 286
    Glycosylasparaginase; Glycosylasparaginase and similar proteins

  3. XM_013942154.2 → XP_013797608.1  N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X2

    UniProtKB/TrEMBL
    A0A8B7IIZ8
    Conserved Domains (1) summary
    cd04513
    Location:2 → 286
    Glycosylasparaginase; Glycosylasparaginase and similar proteins
Nucleotide Protein
Heading Accession and Version

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