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OXSM 3-oxoacyl-ACP synthase, mitochondrial [ Apteryx mantelli (North Island brown kiwi) ]

Gene ID: 106483576, updated on 28-Aug-2024

Summary

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Gene symbol
OXSM
Gene description
3-oxoacyl-ACP synthase, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See OXSM in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current bAptMan1.hap1 (GCF_036417845.1) 2 NC_089979.1 (126066039..126074133, complement)

Chromosome 2 - NC_089979.1Genomic Context describing neighboring genes Neighboring gene NIMA related kinase 10 Neighboring gene leucine rich repeat containing 3B Neighboring gene uncharacterized LOC106483577 Neighboring gene N-glycanase 1 Neighboring gene DNA topoisomerase II beta Neighboring gene retinoic acid receptor beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089979.1 Chromosome 2 Reference bAptMan1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036417845.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAptMan1.hap1

Genomic

  1. NC_089979.1 Reference bAptMan1.hap1

    Range
    126066039..126074133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013941541.2 → XP_013796995.1  3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial

    UniProtKB/TrEMBL
    A0A8B7IFH5
    Conserved Domains (1) summary
    TIGR03150
    Location:41 → 457
    fabF; beta-ketoacyl-acyl-carrier-protein synthase II

  2. XM_013941540.2 → XP_013796994.1  3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial

    UniProtKB/TrEMBL
    A0A8B7IFH5
    Conserved Domains (1) summary
    TIGR03150
    Location:41 → 457
    fabF; beta-ketoacyl-acyl-carrier-protein synthase II

  3. XM_013941539.2 → XP_013796993.1  3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial

    UniProtKB/TrEMBL
    A0A8B7IFH5
    Conserved Domains (1) summary
    TIGR03150
    Location:41 → 457
    fabF; beta-ketoacyl-acyl-carrier-protein synthase II

  4. XM_013941536.2 → XP_013796990.1  3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial

    UniProtKB/TrEMBL
    A0A8B7IFH5
    Conserved Domains (1) summary
    TIGR03150
    Location:41 → 457
    fabF; beta-ketoacyl-acyl-carrier-protein synthase II
Nucleotide Protein
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