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DEGS2 delta 4-desaturase, sphingolipid 2 [ Apteryx mantelli (North Island brown kiwi) ]

Gene ID: 106482961, updated on 28-Aug-2024

Summary

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Gene symbol
DEGS2
Gene description
delta 4-desaturase, sphingolipid 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current bAptMan1.hap1 (GCF_036417845.1) 4 NC_089981.1 (76603651..76633751, complement)

Chromosome 4 - NC_089981.1Genomic Context describing neighboring genes Neighboring gene EMAP like 1 Neighboring gene uncharacterized LOC106482960 Neighboring gene Enah/Vasp-like Neighboring gene YY1 transcription factor Neighboring gene solute carrier family 25 member 29 Neighboring gene solute carrier family 25 member 47

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089981.1 Chromosome 4 Reference bAptMan1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingolipid delta-4 desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphinganine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingolipid delta(4)-desaturase/C4-monooxygenase DES2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036417845.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAptMan1.hap1

Genomic

  1. NC_089981.1 Reference bAptMan1.hap1

    Range
    76603651..76633751 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067294967.1 → XP_067151068.1  sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 isoform X2

  2. XM_067294966.1 → XP_067151067.1  sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 isoform X1

RNA

  1. XR_010883955.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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