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CLEC16A C-type lectin domain containing 16A [ Apteryx mantelli (North Island brown kiwi) ]

Gene ID: 106482610, updated on 28-Aug-2024

Summary

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Gene symbol
CLEC16A
Gene description
C-type lectin domain containing 16A
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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See CLEC16A in Genome Data Viewer
Location:
chromosome: 16
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2024_08 current bAptMan1.hap1 (GCF_036417845.1) 16 NC_089993.1 (8896987..8990460)

Chromosome 16 - NC_089993.1Genomic Context describing neighboring genes Neighboring gene class II major histocompatibility complex transactivator Neighboring gene Dexi homolog Neighboring gene suppressor of cytokine signaling 1 Neighboring gene RecQ mediated genome instability 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089993.1 Chromosome 16 Reference bAptMan1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of autophagosome maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endolysosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CLEC16A
Names
C-type lectin domain family 16 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036417845.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAptMan1.hap1

Genomic

  1. NC_089993.1 Reference bAptMan1.hap1

    Range
    8896987..8990460
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067305990.1 → XP_067162091.1  protein CLEC16A isoform X1

  2. XM_067305991.1 → XP_067162092.1  protein CLEC16A isoform X2

  3. XM_067305992.1 → XP_067162093.1  protein CLEC16A isoform X3

RNA

  1. XR_010885780.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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