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RNU1-143P RNA, U1 small nuclear 143, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481634, updated on 17-Sep-2024

Summary

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Official Symbol
RNU1-143Pprovided by HGNC
Official Full Name
RNA, U1 small nuclear 143, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48485
See related
Ensembl:ENSG00000252105 AllianceGenome:HGNC:48485
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU1-143P in Genome Data Viewer
Location:
1q21.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (143791542..143791687, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (142863647..142863792, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (149286177..149286322, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene NBPF member 6 pseudogene Neighboring gene family with sequence similarity 91 member A3, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:149285989-149286613 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:149286614-149287237 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:149287238-149287862 Neighboring gene tRNA-Phe (anticodon GAA) 9-1 Neighboring gene long intergenic non-protein coding RNA 2591 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:149290176-149290676 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:149290677-149291177 Neighboring gene tRNA-Val (CAC) 8-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044696.1 

    Range
    101..246
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    143791542..143791687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    142863647..142863792 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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