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RNU1-65P RNA, U1 small nuclear 65, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481614, updated on 17-Sep-2024

Summary

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Official Symbol
RNU1-65Pprovided by HGNC
Official Full Name
RNA, U1 small nuclear 65, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48407
See related
Ensembl:ENSG00000200789 AllianceGenome:HGNC:48407
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU1-65P in Genome Data Viewer
Location:
10q23.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (84003332..84003479)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (84881463..84881610)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (85763088..85763235)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984181 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:85691876-85692426 Neighboring gene uncharacterized LOC105378398 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr10:85716832-85717790 Neighboring gene uncharacterized LOC105378399 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr10:85743139-85744338 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3673 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_17591 Neighboring gene high mobility group nucleosomal binding domain 2 pseudogene 8 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:85898633-85899202 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:85899203-85899772 Neighboring gene growth hormone inducible transmembrane protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044537.1 

    Range
    101..248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    84003332..84003479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    84881463..84881610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases