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RNU6-1073P RNA, U6 small nuclear 1073, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481518, updated on 17-Sep-2024

Summary

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Official Symbol
RNU6-1073Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 1073, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48036
See related
Ensembl:ENSG00000252991 AllianceGenome:HGNC:48036
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-1073P in Genome Data Viewer
Location:
9p24.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (1001858..1001963, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (1003406..1003511, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (1001858..1001963, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28120 Neighboring gene doublesex and mab-3 related transcription factor 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19726 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28121 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:969074-969636 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:970761-971321 Neighboring gene VISTA enhancer hs112 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:975821-976322 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:976323-976822 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:981223-981729 Neighboring gene doublesex and mab-3 related transcription factor 3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19727 Neighboring gene H3 histone pseudogene 29 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:1046691-1047556 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:1047960-1048147 Neighboring gene long intergenic non-coding adipose anti-inflammatory

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043797.1 

    Range
    101..206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    1001858..1001963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    1003406..1003511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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