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RNU6-465P RNA, U6 small nuclear 465, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481326, updated on 17-Sep-2024

Summary

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Official Symbol
RNU6-465Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 465, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47428
See related
Ensembl:ENSG00000207149 AllianceGenome:HGNC:47428
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-465P in Genome Data Viewer
Location:
1p12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (120126974..120127074)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (120140241..120140341)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (120669562..120669662)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:120478863-120479588 Neighboring gene notch receptor 2 Neighboring gene Sharpr-MPRA regulatory region 11377/13297 Neighboring gene negCOR silencer S9 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:120584275-120584776 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:120584777-120585276 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:120601566-120602248 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:120602249-120602930 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:120604007-120604544 Neighboring gene uncharacterized LOC101929178 Neighboring gene NANOG hESC enhancer GRCh37_chr1:120623938-120624439 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:145096721-145097286 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:145096155-145096720 Neighboring gene SEC22 homolog B, vesicle trafficking protein Neighboring gene uncharacterized LOC100996723 Neighboring gene NANOG hESC enhancer GRCh37_chr1:144689698-144690199 Neighboring gene uncharacterized LOC124904391

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044276.1 

    Range
    101..201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    120126974..120127074
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    120140241..120140341
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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