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RN7SL541P RNA, 7SL, cytoplasmic 541, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481069, updated on 17-Sep-2024

Summary

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Official Symbol
RN7SL541Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 541, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46557
See related
Ensembl:ENSG00000240250 AllianceGenome:HGNC:46557
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RN7SL541P in Genome Data Viewer
Location:
5q31.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (134517810..134518092)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (135043430..135043712)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (133853501..133853783)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23147 Neighboring gene RNA, U6 small nuclear 456, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:133841857-133842511 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:133844767-133845440 Neighboring gene long intergenic non-protein coding RNA 1843 Neighboring gene uncharacterized LOC124901070 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16358 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16359 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16360 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16361 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16362 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16363 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16364 Neighboring gene jade family PHD finger 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:133868144-133868644 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:133873253-133873806 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:133874500-133875431 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:133875432-133876362 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:133876363-133877294 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23150 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23151 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23152 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23153 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23154 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:133884143-133885142 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23155 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16365 Neighboring gene U7 small nuclear RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044267.1 

    Range
    101..383
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    134517810..134518092
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    135043430..135043712
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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